BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C07SP1|AL425503
(1026 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 1928 0.0
>3x_Contig1602
Length = 12694
Score = 1928 bits (969), Expect = 0.0
Identities = 1015/1028 (98%), Gaps = 6/1028 (0%)
Strand = Plus / Minus
Query: 1 gtatcttctttcttgatggactaaaccgacctctttaaccttagttgtattcaagtcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4137 gtatcttctttcttgatggactaaaccgacctctttaaccttagttgtattcaagtcagt 4078
Query: 61 atgtggtaccttagaaaatgtgtctgtttcttcgttatattcatatagataccagcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4077 atgtggtaccttagaaaatgtgtctgtttcttcgttatattcatatagataccagcttac 4018
Query: 121 accatatggtttgggctccaaacagtacacggaatgtagggggacatccaaatttgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4017 accatatggtttgggctccaaacagtacacggaatgtagggggacatccaaatttgtaat 3958
Query: 181 aacgtccttactcaagttcaaaaaataaccaagtaaaactcttgctaccactcgatgcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3957 aacgtccttactcaagttcaaaaaataaccaagtaaaactcttgctaccactcgatgcgt 3898
Query: 241 gacgattagaagattatccgtaattctttctatttctgtaatcacagggcgtaacctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3897 gacgattagaagattatccgtaattctttctatttctgtaatcacagggcgtaacctgtt 3838
Query: 301 aataacatccatataagattcacctccaatgccaggatatctataccttaacttgtctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3837 aataacatccatataagattcacctccaatgccaggatatctataccttaacttgtctag 3778
Query: 361 aagcctttcttcatattcttcaggagagcgtas-aatatttcttcgtatgtcagcccatc 419
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 3777 aagcctttcttcatattcttcaggagagcgtagcaatatttcttcgtatgtaagcccatc 3718
Query: 420 aaaatcacctgcacttaactcatctaacattttcatttgtttaatgtcaaaatgcctgtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3717 aaaatcacctgcacttaactcatctaacattttcatttgtttaatgtcaaaatgcctgtc 3658
Query: 480 attaaaagtgcatgcggtasc-atagctctttttttcattgatgtccatacaaaamattc 538
||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 3657 attaaaagtgcatgcggtagccatagctctttttttcattgatgtccatacaaaaaattc 3598
Query: 539 tgtcggcgtaaactcatgtttggtatcttgagtgcmaactttcaagtgttctttcatttg 598
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3597 tgtcggcgtaaactcatgtttggtatcttgagtgcaaactttcaagtgttctttcatttg 3538
Query: 599 attctcattgaaaagctttctttgttcctccataaacctggctaaagctcttgcatattt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3537 attctcattgaaaagctttctttgttcctccataaacctggctaaagctcttgcatattt 3478
Query: 659 camaccacgtttagttagttgagaatcaccaccgattttaccagagacgttaaattcact 718
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3477 caaaccacgtttagttagttgagaatcaccaccgattttaccagagacgttaaattcact 3418
Query: 719 ttcaccactccttgtaatccagatttgtctctcagcaagattgaagtttaatagatagta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3417 ttcaccactccttgtaatccagatttgtctctcagcaagattgaagtttaatagatagta 3358
Query: 779 tactgtttgtgaagccaagaatccctgtatatcataggaaacaatttttttaccaatgtc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3357 tactgtttgtgaagccaagaatccctgtatatcataggaaacaatttttttaccaatgtc 3298
Query: 839 gatcatcttgatgtatggaacattttcatcgtcttcgatggtctcatactttttcatata 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3297 gatcatcttgatgtatggaacattttcatcgtcttcgatggtctcatactttttcatata 3238
Query: 899 attagacaatcttcccttgaaatctgataaagatgactcaggatctttccccttataatc 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3237 attagacaatcttcccttgaaatctgataaagatgactcaggatctttccccttataatc 3178
Query: 959 tggt-ccagtagtttcattcttatattc-tttcgacggtctctttatccga--maatact 1014
|||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 3177 tggtcccagtagtttcattcttatattcttttcgacggtctctttatccgaacaaatact 3118
Query: 1015 ttctagga 1022
||||||||
Sbjct: 3117 ttctagga 3110
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8342
Number of Sequences: 1807
Number of extensions: 8342
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 1026
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1010
effective length of database: 10,329,639
effective search space: 10432935390
effective search space used: 10432935390
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)